Arabidopsis thaliana - Tiling Array Express

Supplementary data and information for

Laubinger S., Zeller G., Henz S.R., Sachsenberg T., Widmer C.K., Naouar N., Vuylsteke M., Schölkopf B., Rätsch G. and Weigel D. (2008) At-TAX: a whole genome tiling array resource for developmental expression analysis and transcript identification in Arabidopsis thaliana, submitted.

Visualizations

Tiling array hybridization intensities, probe set definitions for Arabidopsis genes and segmentations into exonic and background regions are visualized in a genome browser.

Visualizations of gene expression and cross-platform comparisons are available through tileViz.

Supplementary data

Files containing genomic locations of all transcribed regions predicted by mSTAD are available for download from our ftp server. Repeat data and definition files for the mapping of tiling probes to annotated gene models are also provided.

Related links

If you want to learn more about mSTAD, the segmentation method used for the detection of novel transcripts, please, have a look at the mSTAD homepage.