AtGenExpress

by admin — last modified Mar 25, 2008 03:24 PM

Microarray data and sample descriptions from the AtGenExpress project

Link Interactive visualization of AtGenExpress data — by Detlef Weigel — last modified May 17, 2009 09:50 PM
 
File Sample List (Light) — by Markus Schmid — last modified Mar 25, 2008 02:24 PM
AtGenExpress light series sample list and description
File Abiotic stress analysis paper — by Stefan Henz — last modified Nov 07, 2008 07:49 PM
To cite data from the abiotic stress set, please refer to: Kilian, J., Whitehead, D., Horak, J., Wanke, D., Weinl, S., Batistic, O., D'Angelo, Bornberg-Bauer, E., Kudla, J., and Harter, K. (2007) The AtGenExpress global stress expression data set: protocols, evaluation and model data analysis of UV-B light, drought and cold stress responses. Plant J. 50, 347-363.
File Expression data (Light) — by Markus Schmid — last modified Mar 25, 2008 02:24 PM
AtGenExpress (Light) expression estimates by gcRMA
File Sample list (Pathogen) — by Markus Schmid — last modified Mar 25, 2008 02:24 PM
AtGenExpress pathogen series sample list and description
File Marker genes (Development) from Schmid et al., 2005 — by Detlef Weigel — last modified Mar 25, 2008 02:24 PM
Marker genes for different tissues as shown in Figure 1c of Schmid et al. (2005) Nat. Genet. 37, 501-506.
File READ ME - Development — by admin — last modified Mar 25, 2008 02:24 PM
To cite data from the developmental set, please refer to: Schmid, M., Davison, T. S., Henz, S. R., Pape, U. J., Demar, M., Vingron, M. Schölkopf, B. Weigel, D., and Lohmann, J. (2005) A gene expression map of Arabidopsis development. Nature Genetics, 37, 501-506. Download here.
File Expression data (Development) — by admin — last modified Mar 25, 2008 02:24 PM
AtGenExpress (Development) expression estimates by gcRMA
File Expression data (Ecotypes) — by Markus Schmid — last modified Mar 25, 2008 02:24 PM
AtGenExpress (Ecotypes) expression estimates by gcRMA
File Sample list (Development) — by admin — last modified Mar 25, 2008 02:24 PM
AtGenExpress developmental series sample list and description
File Expression data (Abiotic stress) — by admin — last modified Mar 25, 2008 02:24 PM
AtGenExpress (Abiotic stress) expression estimates by gcRMA
File Sample list (Abiotic stress) — by admin — last modified Mar 25, 2008 02:24 PM
AtGenExpress abiotic stress series sample list and description
File Sample list (Ecotypes) — by Markus Schmid — last modified Mar 25, 2008 02:24 PM
AtGenExpress ecotypes series sample list and description
File Probe preparation (Development) — by admin — last modified Mar 25, 2008 02:24 PM
AtGenExpress developmental series probe preparation protocol
File Expression data (Pathogen) — by Markus Schmid — last modified Mar 25, 2008 02:24 PM
AtGenExpress (Pathogen) expression estimates by gcRMA
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