Stefan Henz's CV and publications

Curriculum Vitae

Academic education

1986-1992	Diploma in Physics, Ruprecht-Karls University Heidelberg, Germany; Advisor: Prof. I. Bender
1992-1997	Ph.D. in Ultrashort Pulses and Laser Physics, Max Born Institute, Berlin, Germany; Advisor: Dr. J. Herrmann, Prof. T. Elsässer
1998	Ph.D. examination, Humboldt University of Berlin, Germany

Professional activities

2003-	staff scientist in Bioinformatics, Department of Molecular Biology, Max Planck Institute for Developmental Biology, Tübingen, Germany
2002-2003	Postdoctoral position in Bioinformatics, Group for Algorithms in Bioinformatics, Institute for Computer Science, Eberhard Karls University, Tübingen, Germany
2001-2002	Bioinformatician and theoretical physicist, leadership of the Bioinformatics, LifeBits AG, Tübingen, Germany
2000-2001	Java software engineer in e-commerce, abaXX Technology GmbH, Stuttgart, Germany, and Intershop Communications GmbH, Stuttgart, Germany
	Software engineer for software tools for banks, LeuTek GmbH & Co., Leinfelden-Echterdingen, Germany
1997-2000	Unix system administrator and leadership of the group ''Querschnittsbereich'', science + computing GmbH, Tübingen, Germany

Publications

Laubinger S., Zeller G., Henz S. R., Sachsenberg T., Widmer C.K., Naouar N., Vuylsteke M., Schölkopf B., Rätsch G., and Weigel D., At-TAX: a whole genome tiling array resource for developmental expression analysis and transcript identification in Arabidopsis thaliana Genome Biol. 2008, Jul 9:9(8):R112

Zeller G., Henz S. R., Laubinger S., and Weigel D., Transcript Normalization and Segmentation of Tiling Array Data, Pacific Symposium on Biocomputing 12, 527-538 (2008)

Dreyer C., Hoffmann M., Lanz C., Willing E.-M., Riester M., Warthmann N., Sprecher A., Tripathi N., Henz S. R., and Weigel, D., ESTs and EST-linked polymorphisms for genetic mapping and phylogenetic reconstruction in the guppy, Poecilia reticulata, BMC Genomics 8:269(2007)

Henz S. R. , Cumbie J. S., Kasschau K. D., Lohmann J. U., Carrington J. C., Weigel D., and Schmid M., Distinct expression patterns of natural antisense transcripts in Arabidopsis, Plant Physiology (2007, published online May 11, 2007)

Hueber S. D., Bezdan D., Henz S. R., Blank M., Wu H., and Lohmann I., Comparative analysis of Hox downstream genes in Drosophila, Development 134(2):381-392 (2007, Epub 2006)

Hoffmann M., Tripathi N., Henz S. R., Lindholm A. K., Weigel D., Breden F., and Dreyer C., Opsin gene duplication and diversification in the guppy, a model for sexual selection, Proceedings of the Royal Society B: Biological Sciences, 274(1606):33-42 (2007)

Auch A. F., Henz S. R., Holland B. R., and Göker M., Genome BLAST distance phylogenies inferred from whole plastid and whole mitochondrion genome sequences, BMC Bioinformatics 19, 7:350 (2006)

Ahn J. H., Miller D., Winter V. J., Banfield M. J., Lee J. H., Yoo S. Y., Henz S. R., Brady R. L., and Weigel D., A divergent external loop confers antagonistic activity on floral regulators FT and TFL1, EMBO Journal 25, 605-614 (2006)

de Folter S., Immink R. G., Kieffer M., Parenicova L., Henz S. R., Weigel D., Busscher M., Kooiker M., Colombo L., Kater M.M., Davies B., and Angenent G. C., Comprehensive interaction map of the Arabidopsis MADS Box transcription factors, Plant Cell 17(5), 605-614 (2005)

Schmid M., Davison T. S., Henz S. R., Pape U. J., Demar M. , Vingron M. , Schölkopf B., and Weigel D., A gene expression map of Arabidopsis thaliana development, Nature Genetics 37(5), 501-506 (2005)

Henz S. R., Huson D. H., Auch A. F. , Nieselt-Struwe K. , and Schuster S. C., Whole-genome prokaryotic phylogeny, Bioinformatics 21(10),2329-2335 (2005,Epub 2004)

Henz S. R., Auch A. F., Huson D. H., Nieselt-Struwe K. , and Schuster S. C., Whole Genome-based Prokaryotic Phylogeny , Short paper in ECCB (2003)

Henz S. and Herrmann J., Self-channeling and pulse shortening of femtosecond pulses in multiphoton-ionized dispersive dielectric solids , Phys. Rev. A 59, 2528-2531 (1999)

Ashkenasi D., Varel H., Rosenfeld A., Henz S., Herrmann J., and Cambell E. E. B., Application of self-focusing of ps laser pulses for three-dimensional microstructuring of transparent materials, Appl. Phys. Lett. 72, 1442-1444 (1998)

Henz S. and Herrmann J., Two-dimensional spatial optical solitons in bulk Kerr media stabilized by self-induced multiphoton ionization: Variational approach, Phys. Rev. E 53, 4092-4097 (1996)